.. _api:

Documentation of WormPose.
==========================

.. toctree::
   :caption: Documentation

.. autosummary::
   :toctree: _autosummary

   wormpose.commands.calibrate_dataset
   wormpose.commands.evaluate_model
   wormpose.commands.export_results
   wormpose.commands.generate_training_data
   wormpose.commands.postprocess_results
   wormpose.commands.predict_dataset
   wormpose.commands.train_model
   wormpose.commands.utils.results_saver
   wormpose.commands.utils.time_sampling
   wormpose.commands.visualize_results
   wormpose.config.default_paths
   wormpose.config.experiment_config
   wormpose.dataset.base_dataset
   wormpose.dataset.features
   wormpose.dataset.image_processing.frame_preprocessor
   wormpose.dataset.image_processing.image_utils
   wormpose.dataset.image_processing.options
   wormpose.dataset.image_processing.simple_frame_preprocessing
   wormpose.dataset.loader
   wormpose.dataset.loaders.hdf5features
   wormpose.dataset.loaders.images_folder
   wormpose.dataset.loaders.resizer
   wormpose.dataset.loaders.sample_data
   wormpose.dataset.loaders.tierpsy.features_dataset
   wormpose.dataset.loaders.tierpsy.frames_dataset
   wormpose.dataset.loaders.tierpsy.results_exporter
   wormpose.demo.real_simple_visualizer
   wormpose.demo.synthetic_simple_visualizer
   wormpose.images.real_dataset
   wormpose.images.scoring.centerline_accuracy_check
   wormpose.images.scoring.image_scoring
   wormpose.images.scoring.results_scoring
   wormpose.images.scoring.scoring_data_manager
   wormpose.images.synthetic.synthetic_dataset
   wormpose.images.worm_drawing
   wormpose.machine_learning.best_models_saver
   wormpose.machine_learning.eval_data_generator
   wormpose.machine_learning.generic_file_writer
   wormpose.machine_learning.loss
   wormpose.machine_learning.model
   wormpose.machine_learning.predict_data_generator
   wormpose.machine_learning.synthetic_data_generator
   wormpose.machine_learning.tfrecord_file
   wormpose.pose.centerline
   wormpose.pose.distance_metrics
   wormpose.pose.eigenworms
   wormpose.pose.headtail_resolution
   wormpose.pose.postures_model
   wormpose.pose.results_datatypes
   wormpose.version